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chromium single cell 50 v2 gene expression dual index libraries  (10X Genomics)

 
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    10X Genomics chromium single cell 50 v2 gene expression dual index libraries
    Chromium Single Cell 50 V2 Gene Expression Dual Index Libraries, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/chromium+single+cell+gene+expression+libraries/pm42152613-43-0-18?v=10X+Genomics
    Average 86 stars, based on 1 article reviews
    chromium single cell 50 v2 gene expression dual index libraries - by Bioz Stars, 2026-08
    86/100 stars

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    A UMAP projection of the single-nucleus multiomics (combined RNA-seq and <t>ATAC-seq)</t> data from E14.5 testes, color-coded by cell clusters. B Dot plot representation of the expression of cell specific marker genes for each cluster. C Feature plots of the normalized expression of interstitial genes on the multiomic UMAP visualization of E14.5 testes. D Immunofluorescence for cluster/cell type specific markers (Yellow) in E14.5 male testes. Samples were counterstained with DAPI (Gray). White arrowheads indicate immunopositive cells. White dashed box indicates the magnified area. E UMAP of the single-nucleus ATAC-seq data from E14.5 testes, color-coded based on the multiomic (combined RNA-seq and ATAC-seq) cell clusters. F Volcano plot of differentially expressed genes between c0 (steroidogenic progenitor cells) and c3 (fetal Leydig cells). Blue and red dots represent significantly upregulated genes in c0 or c3 respectively.
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    A UMAP projection of the single-nucleus multiomics (combined RNA-seq and <t>ATAC-seq)</t> data from E14.5 testes, color-coded by cell clusters. B Dot plot representation of the expression of cell specific marker genes for each cluster. C Feature plots of the normalized expression of interstitial genes on the multiomic UMAP visualization of E14.5 testes. D Immunofluorescence for cluster/cell type specific markers (Yellow) in E14.5 male testes. Samples were counterstained with DAPI (Gray). White arrowheads indicate immunopositive cells. White dashed box indicates the magnified area. E UMAP of the single-nucleus ATAC-seq data from E14.5 testes, color-coded based on the multiomic (combined RNA-seq and ATAC-seq) cell clusters. F Volcano plot of differentially expressed genes between c0 (steroidogenic progenitor cells) and c3 (fetal Leydig cells). Blue and red dots represent significantly upregulated genes in c0 or c3 respectively.
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    Fig. 1. Experimental overview. (A) Schematic outlines approach employed to capture a multimodal portrait of lens development. IHC, immunohistochemistry; HCR-FISH, hybridization chain reaction-fluorescent in-situ hybridization; TF, transcription factor. (B) <t>Workflow</t> summarizes major steps in generating single-nuclei libraries and data processing.
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    Fig. 1. Experimental overview. (A) Schematic outlines approach employed to capture a multimodal portrait of lens development. IHC, immunohistochemistry; HCR-FISH, hybridization chain reaction-fluorescent in-situ hybridization; TF, transcription factor. (B) <t>Workflow</t> summarizes major steps in generating single-nuclei libraries and data processing.
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    Image Search Results


    A UMAP projection of the single-nucleus multiomics (combined RNA-seq and ATAC-seq) data from E14.5 testes, color-coded by cell clusters. B Dot plot representation of the expression of cell specific marker genes for each cluster. C Feature plots of the normalized expression of interstitial genes on the multiomic UMAP visualization of E14.5 testes. D Immunofluorescence for cluster/cell type specific markers (Yellow) in E14.5 male testes. Samples were counterstained with DAPI (Gray). White arrowheads indicate immunopositive cells. White dashed box indicates the magnified area. E UMAP of the single-nucleus ATAC-seq data from E14.5 testes, color-coded based on the multiomic (combined RNA-seq and ATAC-seq) cell clusters. F Volcano plot of differentially expressed genes between c0 (steroidogenic progenitor cells) and c3 (fetal Leydig cells). Blue and red dots represent significantly upregulated genes in c0 or c3 respectively.

    Journal: Nature Communications

    Article Title: NR2F2 regulation of interstitial cell fate in the embryonic mouse testis and its impact on differences of sex development

    doi: 10.1038/s41467-025-59183-6

    Figure Lengend Snippet: A UMAP projection of the single-nucleus multiomics (combined RNA-seq and ATAC-seq) data from E14.5 testes, color-coded by cell clusters. B Dot plot representation of the expression of cell specific marker genes for each cluster. C Feature plots of the normalized expression of interstitial genes on the multiomic UMAP visualization of E14.5 testes. D Immunofluorescence for cluster/cell type specific markers (Yellow) in E14.5 male testes. Samples were counterstained with DAPI (Gray). White arrowheads indicate immunopositive cells. White dashed box indicates the magnified area. E UMAP of the single-nucleus ATAC-seq data from E14.5 testes, color-coded based on the multiomic (combined RNA-seq and ATAC-seq) cell clusters. F Volcano plot of differentially expressed genes between c0 (steroidogenic progenitor cells) and c3 (fetal Leydig cells). Blue and red dots represent significantly upregulated genes in c0 or c3 respectively.

    Article Snippet: The 10X Genomics Chromium Next GEM Single Cell Multiome ATAC + Gene Expression Library Preparation Kit (1000284) was used to generate a 10X barcoded library of mRNA and transposed DNA from individual nucleus.

    Techniques: RNA Sequencing, Expressing, Marker, Immunofluorescence

    Fig. 1. Experimental overview. (A) Schematic outlines approach employed to capture a multimodal portrait of lens development. IHC, immunohistochemistry; HCR-FISH, hybridization chain reaction-fluorescent in-situ hybridization; TF, transcription factor. (B) Workflow summarizes major steps in generating single-nuclei libraries and data processing.

    Journal: Development (Cambridge, England)

    Article Title: Integrated single-cell multiomics uncovers foundational regulatory mechanisms of lens development and pathology.

    doi: 10.1242/dev.202249

    Figure Lengend Snippet: Fig. 1. Experimental overview. (A) Schematic outlines approach employed to capture a multimodal portrait of lens development. IHC, immunohistochemistry; HCR-FISH, hybridization chain reaction-fluorescent in-situ hybridization; TF, transcription factor. (B) Workflow summarizes major steps in generating single-nuclei libraries and data processing.

    Article Snippet: Single nucleus multiome profiling library preparation and data generation Nuclei were subjected to the Chromium Next GEM Single Cell Multiome ATAC+Gene Expression library preparation workflow (10X Genomics, 1000285 and 1000230) following 10X Genomics protocol CG000338 Rev F, loading ∼16,000 nuclei per reaction.

    Techniques: Immunohistochemistry, Hybridization, In Situ Hybridization